Information for 5-CTTCTSATAAWAAAAG (Motif 8)

A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
Reverse Opposite:
A G T C C G A T C G A T A G C T A G C T G C A T A C G T A C G T G T C A C G A T A T C G C G T A A C T G C T G A C G T A C T A G
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.739
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.2 +/- 21.8bp
Average Position of motif in Background52.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTSATAAWAAAAG
TAAACTGATAAGAAGAT
 A C G T A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTSATAAWAAAAG
AAAGCTCGTAAAATTT-
 A C G T A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG
--NCYAATAAAA----
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG
---CCAATAAAAA---
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTCTSATAAWAAAAG
TCCATCCCATAATACTC-
 A C G T A C G T A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG
---GTCGTAAAAT---
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG
------GTCATAAAAN
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG--
----AAATAAGAAAAAAC
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG
--GCTCGTAAAAA---
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTTCTSATAAWAAAAG
------GCAATAAAA-
 A G T C C G A T A G C T T A G C C G A T A T G C C G T A A C G T G T C A C G T A C G T A T C G A C T G A C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T