Information for 10-GCAGGCACTG (Motif 35)

T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
Reverse Opposite:
A T G C G T C A A T C G A C G T C T A G A T G C A G T C A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.326e+01
Information Content per bp:1.772
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.33%
Number of Background Sequences with motif1080.9
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets53.5 +/- 28.7bp
Average Position of motif in Background51.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCAGGCACTG----------
YCAGGCWCAGTACCAGGCTC
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAGGCACTG-------
-CAATCACTGGCAGAAT
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAGGCACTG
TBGCACGCAA--
 A C G T A C G T T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGGCACTG
BCAGACWA--
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGGCACTG--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGGCACTG
CCAGACRSVB
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGGCACTG
CCAGACAG--
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGGCACTG
CCAGGAACAG
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCACTG
TGCGCAGGCGC--
 A C G T A C G T A C G T T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGGCACTG
ACAGGAAGTG
 T C A G A G T C C G T A C T A G T A C G G A T C T G C A A T G C A C G T A T C G
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G