Information for 17-GACCKGACACTCT (Motif 20)

A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
Reverse Opposite:
C G T A A T C G G C T A A C T G A C G T A C T G A C G T A G T C G T A C A C T G A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.834
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 29.8bp
Average Position of motif in Background52.8 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GACCKGACACTCT
-ARNTGACA----
 A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GACCKGACACTCT
---TTGACAG---
 A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GACCKGACACTCT
GGAAGTGAAAST--
 A C G T A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GACCKGACACTCT
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACCKGACACTCT
CGGAAGTGAAAC---
 A C G T A C G T A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GACCKGACACTCT
-VGCTGWCAVB--
 A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GACCKGACACTCT
GATGACGTGGCANT--
 A C G T A C G T A C G T A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GACCKGACACTCT-
-----GACAATGNN
 A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GACCKGACACTCT
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GACCKGACACTCT-
--NCTGTCAATCAN
 A C T G C G T A G T A C T A G C A C T G A C T G C G T A A G T C G T C A G T A C C A G T A T G C A C G T A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A