Information for 10-AGATTAATCT (Motif 15)

C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
Reverse Opposite:
C G T A A C T G G C T A C A G T G C A T G T C A G T C A A C G T G T A C C G A T
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.719
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif517.2
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets51.8 +/- 31.0bp
Average Position of motif in Background50.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAATCT
NTAATTAATAT
 A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAATCT
NGGATTAA---
 A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGATTAATCT
RGGATTAR---
 A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGATTAATCT
--ATTAAA--
 C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGATTAATCT--
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGATTAATCT--
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGATTAATCT--
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGATTAATCT--
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAATCT
GGGATTAA---
 A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAATCT
CGGATTAN---
 A C G T C G T A C A T G C G T A C A G T C A G T C G T A G T C A C G A T T G A C A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T