Information for 3-TTCAAGATTATCTTTA (Motif 12)

C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
Reverse Opposite:
G C A T G T C A C G T A C G T A T C A G C G T A A G C T G T C A C T G A C A G T A T G C C G A T A G C T A T C G C T G A G T C A
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.690
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 22.2bp
Average Position of motif in Background61.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCAAGATTATCTTTA
TTCAAGGTCAT-----
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCAAGATTATCTTTA
-TAATGATGATCACTA
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCAAGATTATCTTTA
-TCAAGGTCATA----
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCAAGATTATCTTTA--
-NNANTCTTATCTNNNNN
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A A C G T A C G T
A C G T A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCAAGATTATCTTTA
-TCAAGGTCAT-----
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTCAAGATTATCTTTA
TATTCAAGGTCATGCGA-
 A C G T A C G T C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTCAAGATTATCTTTA
---AAGGATATNTN--
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCAAGATTATCTTTA--
--NANTATTATAATTNNN
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A A C G T A C G T
A C G T A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTCAAGATTATCTTTA
-----YSTTATCT---
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTCAAGATTATCTTTA
-----TCTTATCT---
 C A G T G A C T T A G C C T G A C G T A A T C G G C T A A G C T C A G T C T G A C G A T A G T C C G A T C G A T C A G T C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T