Information for 11-GTGTACCAAAGAY (Motif 10)

T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
Reverse Opposite:
T C G A G A C T A G T C G C A T A C G T C G A T C T A G C A T G A C G T G C T A T G A C G T C A A T G C
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.582
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 24.3bp
Average Position of motif in Background54.9 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGTACCAAAGAY
-GGTGCCAAGT--
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGTACCAAAGAY
---TGCCAA----
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGTACCAAAGAY
-CGTGCCAAG---
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGTACCAAAGAY
CTGTTCCTGG---
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTGTACCAAAGAY
--TTGCCAAG---
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGTACCAAAGAY
-TTTTCCA-----
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGTACCAAAGAY
TTATGTACTAATAA-
 A C G T A C G T T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGTACCAAAGAY-
GGGTGTGCCCAAAAGG
 A C G T A C G T T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGTACCAAAGAY
AATGTATCAAT---
 A C G T T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGTACCAAAGAY
HTTTCCCASG---
 T A C G C A G T A C T G C A G T T G C A G T A C A G T C C G T A T G C A C G T A T A C G C T G A A G C T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T