Information for 4-TWAAAKRTTTDHTCWT (Motif 9)

A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
Reverse Opposite:
T G C A C G A T T C A G C G T A C A G T G C T A G C T A C T G A C G T A A G C T G T C A C G A T C A G T C G A T C G T A G T C A
p-value:1e-11
log p-value:-2.746e+01
Information Content per bp:1.588
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.32%
Number of Background Sequences with motif670.8
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets48.6 +/- 25.7bp
Average Position of motif in Background47.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TWAAAKRTTTDHTCWT
--GAATGTTTGTTT--
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TWAAAKRTTTDHTCWT
-------TTTAAT---
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TWAAAKRTTTDHTCWT
-----TRTTTACTTW-
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TWAAAKRTTTDHTCWT--
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TWAAAKRTTTDHTCWT-
--AACCCTTTGATCTTT
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T A C G T
A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TWAAAKRTTTDHTCWT
------ATTGCATCAT
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TWAAAKRTTTDHTCWT
-----TGTTTACTTT-
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TWAAAKRTTTDHTCWT---
--NTNAATTTTATTGNATT
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TWAAAKRTTTDHTCWT
-TCCATGTTTACTTTG
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TWAAAKRTTTDHTCWT
-----TGTTTACTTT-
 A C G T C G A T G C T A G T C A G C T A C A G T T C G A A C G T G A C T C G A T C G A T G T C A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T