Information for 10-GAGATGACCC (Motif 7)

T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C
Reverse Opposite:
C A T G C A T G C T A G A G C T A T G C C G T A G C A T A G T C C A G T A T G C
p-value:1e-13
log p-value:-2.994e+01
Information Content per bp:1.717
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.10%
Number of Background Sequences with motif798.8
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets50.0 +/- 23.0bp
Average Position of motif in Background50.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GAGATGACCC------
NNANTTGACCCCTNNNN
 A C G T T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GAGATGACCC
----TGACCT
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GAGATGACCC------
TGTCGTGACCCCTTAAT
 A C G T T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAGATGACCC------
NNNNTGACCCGGCGCG
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GAGATGACCC--
----TGACCYCT
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAGATGACCC------
NNCNTGACCCCGCTCT
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAGATGACCC
--CATGAC--
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAGATGACCC------
NNNNTTGACCCCTNNNN
 A C G T T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAGATGACCC--
----TGACCTYA
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGATGACCC---
CNNTTGACCTTTG
 T A C G G T C A A C T G C G T A A C G T A T C G T C G A G A T C G T A C G T A C A C G T A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G