Information for 19-AGCCACATTG (Motif 25)

C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G
Reverse Opposite:
A G T C C G T A G T C A C A G T C A T G C G A T A C T G T C A G G T A C A C G T
p-value:1e-5
log p-value:-1.365e+01
Information Content per bp:1.765
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif308.5
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets56.1 +/- 26.5bp
Average Position of motif in Background49.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCCACATTG
CAGCC------
 A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACATTG
GCNGCCATCTTG
 A C G T A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCCACATTG----
YDGHTACAWTGTADC
 A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCCACATTG----
TWGHWACAWTGTWDC
 A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCCACATTG------
TGTTCCCATTGTGTACT
 A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCCACATTG--
---CTCATTGTC
 C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T A C G T
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCCACATTG
SCCTAGCAACAG--
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGCCACATTG-
-----CTTTGT
 C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCCACATTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCCACATTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T C G T A A C T G A G T C T G A C C G T A G T A C G T C A A C G T A C G T T C A G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G