Information for 17-CAGCCTGCGG (Motif 19)

A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G
Reverse Opposite:
A G T C A T G C C A T G G T A C C G T A A T C G A C T G A T G C A C G T A C T G
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.825
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif72.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets63.3 +/- 13.8bp
Average Position of motif in Background50.7 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGCGG--
-NGCCTGAGGCN
 A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGCGG--
-TGCCTGAGGCN
 A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGCGG--
-NGCCTNAGGCN
 A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTGCGG----
ATTGCCTGAGGCAAT
 A C G T A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTGCGG
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGCGG
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCTGCGG
CAGCC-----
 A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGCGG
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGCCTGCGG----
--SCCTSAGGSCAW
 A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCCTGCGG--
CCCCCTGCTGTG
 A G T C C G T A A T C G A G T C A T G C A C G T A C T G G T A C A T C G C T A G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G