Information for 12-SCTTTTGACATGT (Motif 15)

A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T
Reverse Opposite:
C T G A A T G C C G T A C G A T C A T G A G C T A G T C T C G A C T G A C G T A C T G A A C T G A T C G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.716
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif140.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets45.4 +/- 26.5bp
Average Position of motif in Background50.4 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT-----
-ANTNNTACATGTANNTN
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT-----
-NNTTTTACATGTANNNT
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT-----
-ANTATTACATGTANNNN
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SCTTTTGACATGT
----TTGACTTTT
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT-----
-ANTTNTACATGTANTTN
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---SCTTTTGACATGT
TGACCTTTTGACCTTT
 A C G T A C G T A C G T A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT-----
-ANTNTTACATGTATNTA
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT-----
-NNTATTACATGTANNNT
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGACATGT----
-NTATTGACAGGTNNTN
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:SCTTTTGACATGT
-----TGGAATGT
 A T G C G T A C A G C T C G A T A G C T A G C T C T A G C T G A G T A C C G T A A C G T A T C G A G C T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T