Information for 7-NCAAGRTMAD (Motif 7)

A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
Reverse Opposite:
G C T A C G A T A C T G T G C A G A T C G A T C G A C T C G A T C A T G T A G C
p-value:1e-17
log p-value:-4.044e+01
Information Content per bp:1.445
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif11.65%
Number of Background Sequences with motif1977.7
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets53.9 +/- 27.6bp
Average Position of motif in Background48.1 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:NCAAGRTMAD
TCAAGGTCAT
 A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:NCAAGRTMAD-
TCAAGGTCATA
 A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---NCAAGRTMAD----
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:NCAAGRTMAD
TCAAGGTCAN
 A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:NCAAGRTMAD-
-CAAGGHCANV
 A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-NCAAGRTMAD
BTCAAGGTCA-
 A C G T A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-NCAAGRTMAD
TTCAAGGTCAT
 A C G T A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---NCAAGRTMAD
ANGNAAAGGTCA-
 A C G T A C G T A C G T A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-NCAAGRTMAD
NTCAAGGTCA-
 A C G T A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---NCAAGRTMAD---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A T C G G T A C G C T A C T G A C T A G C T A G A C G T T G A C G C T A C G A T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G