Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-64 | -1.482e+02 | 0.0000 | 100.0 | 12.63% | 598.2 | 1.27% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-42 | -9.738e+01 | 0.0000 | 158.0 | 19.95% | 2680.6 | 5.69% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-40 | -9.331e+01 | 0.0000 | 135.0 | 17.05% | 2060.2 | 4.37% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-36 | -8.442e+01 | 0.0000 | 135.0 | 17.05% | 2244.9 | 4.76% | motif file (matrix) |
svg |
5 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-34 | -8.036e+01 | 0.0000 | 351.0 | 44.32% | 11350.4 | 24.09% | motif file (matrix) |
svg |
6 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-30 | -7.029e+01 | 0.0000 | 123.0 | 15.53% | 2189.4 | 4.65% | motif file (matrix) |
svg |
7 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-30 | -6.999e+01 | 0.0000 | 112.0 | 14.14% | 1850.6 | 3.93% | motif file (matrix) |
svg |
8 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-30 | -6.933e+01 | 0.0000 | 186.0 | 23.48% | 4486.3 | 9.52% | motif file (matrix) |
svg |
9 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-23 | -5.428e+01 | 0.0000 | 51.0 | 6.44% | 488.6 | 1.04% | motif file (matrix) |
svg |
10 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-23 | -5.329e+01 | 0.0000 | 94.0 | 11.87% | 1673.2 | 3.55% | motif file (matrix) |
svg |
11 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-22 | -5.193e+01 | 0.0000 | 108.0 | 13.64% | 2173.0 | 4.61% | motif file (matrix) |
svg |
12 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-22 | -5.139e+01 | 0.0000 | 56.0 | 7.07% | 637.4 | 1.35% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-22 | -5.124e+01 | 0.0000 | 60.0 | 7.58% | 738.0 | 1.57% | motif file (matrix) |
svg |
14 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-22 | -5.079e+01 | 0.0000 | 80.0 | 10.10% | 1298.3 | 2.76% | motif file (matrix) |
svg |
15 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-21 | -4.888e+01 | 0.0000 | 85.0 | 10.73% | 1495.6 | 3.17% | motif file (matrix) |
svg |
16 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-20 | -4.789e+01 | 0.0000 | 77.0 | 9.72% | 1271.8 | 2.70% | motif file (matrix) |
svg |
17 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-19 | -4.494e+01 | 0.0000 | 83.0 | 10.48% | 1529.5 | 3.25% | motif file (matrix) |
svg |
18 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-19 | -4.478e+01 | 0.0000 | 70.0 | 8.84% | 1129.5 | 2.40% | motif file (matrix) |
svg |
19 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-19 | -4.376e+01 | 0.0000 | 89.0 | 11.24% | 1759.2 | 3.73% | motif file (matrix) |
svg |
20 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.601e+01 | 0.0000 | 174.0 | 21.97% | 5510.5 | 11.70% | motif file (matrix) |
svg |
21 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-14 | -3.415e+01 | 0.0000 | 74.0 | 9.34% | 1529.4 | 3.25% | motif file (matrix) |
svg |
22 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-14 | -3.245e+01 | 0.0000 | 78.0 | 9.85% | 1724.1 | 3.66% | motif file (matrix) |
svg |
23 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-14 | -3.233e+01 | 0.0000 | 23.0 | 2.90% | 155.8 | 0.33% | motif file (matrix) |
svg |
24 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-13 | -3.079e+01 | 0.0000 | 78.0 | 9.85% | 1781.2 | 3.78% | motif file (matrix) |
svg |
25 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-13 | -3.074e+01 | 0.0000 | 94.0 | 11.87% | 2388.6 | 5.07% | motif file (matrix) |
svg |
26 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-12 | -2.990e+01 | 0.0000 | 50.0 | 6.31% | 860.0 | 1.83% | motif file (matrix) |
svg |
27 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-12 | -2.984e+01 | 0.0000 | 79.0 | 9.97% | 1852.8 | 3.93% | motif file (matrix) |
svg |
28 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-11 | -2.691e+01 | 0.0000 | 46.0 | 5.81% | 807.3 | 1.71% | motif file (matrix) |
svg |
29 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.461e+01 | 0.0000 | 118.0 | 14.90% | 3695.5 | 7.84% | motif file (matrix) |
svg |
30 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-10 | -2.412e+01 | 0.0000 | 63.0 | 7.95% | 1471.1 | 3.12% | motif file (matrix) |
svg |
31 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-10 | -2.342e+01 | 0.0000 | 80.0 | 10.10% | 2155.9 | 4.58% | motif file (matrix) |
svg |
32 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.335e+01 | 0.0000 | 28.0 | 3.54% | 364.0 | 0.77% | motif file (matrix) |
svg |
33 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.312e+01 | 0.0000 | 60.0 | 7.58% | 1397.3 | 2.97% | motif file (matrix) |
svg |
34 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.248e+01 | 0.0000 | 64.0 | 8.08% | 1571.5 | 3.34% | motif file (matrix) |
svg |
35 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-9 | -2.212e+01 | 0.0000 | 86.0 | 10.86% | 2463.0 | 5.23% | motif file (matrix) |
svg |
36 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-8 | -2.020e+01 | 0.0000 | 62.0 | 7.83% | 1588.9 | 3.37% | motif file (matrix) |
svg |
37 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-8 | -2.018e+01 | 0.0000 | 30.0 | 3.79% | 478.6 | 1.02% | motif file (matrix) |
svg |
38 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.924e+01 | 0.0000 | 39.0 | 4.92% | 785.9 | 1.67% | motif file (matrix) |
svg |
39 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.838e+01 | 0.0000 | 44.0 | 5.56% | 986.5 | 2.09% | motif file (matrix) |
svg |
40 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.717e+01 | 0.0000 | 15.0 | 1.89% | 142.0 | 0.30% | motif file (matrix) |
svg |
41 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 120.0 | 15.15% | 4443.5 | 9.43% | motif file (matrix) |
svg |
42 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-6 | -1.427e+01 | 0.0000 | 19.0 | 2.40% | 284.9 | 0.60% | motif file (matrix) |
svg |
43 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-5 | -1.360e+01 | 0.0000 | 18.0 | 2.27% | 269.9 | 0.57% | motif file (matrix) |
svg |
44 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-5 | -1.349e+01 | 0.0000 | 23.0 | 2.90% | 421.6 | 0.89% | motif file (matrix) |
svg |
45 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.349e+01 | 0.0000 | 47.0 | 5.93% | 1301.5 | 2.76% | motif file (matrix) |
svg |
46 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-5 | -1.314e+01 | 0.0000 | 42.0 | 5.30% | 1118.3 | 2.37% | motif file (matrix) |
svg |
47 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-5 | -1.312e+01 | 0.0000 | 56.0 | 7.07% | 1693.7 | 3.59% | motif file (matrix) |
svg |
48 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-4 | -1.028e+01 | 0.0003 | 38.0 | 4.80% | 1097.2 | 2.33% | motif file (matrix) |
svg |
49 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.009e+01 | 0.0003 | 63.0 | 7.95% | 2205.9 | 4.68% | motif file (matrix) |
svg |
50 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -1.008e+01 | 0.0003 | 33.0 | 4.17% | 904.1 | 1.92% | motif file (matrix) |
svg |
51 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-4 | -1.007e+01 | 0.0003 | 18.0 | 2.27% | 351.0 | 0.75% | motif file (matrix) |
svg |
52 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.003e+01 | 0.0003 | 62.0 | 7.83% | 2164.8 | 4.59% | motif file (matrix) |
svg |
53 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.857e+00 | 0.0004 | 70.0 | 8.84% | 2549.2 | 5.41% | motif file (matrix) |
svg |
54 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.674e+00 | 0.0004 | 10.0 | 1.26% | 124.3 | 0.26% | motif file (matrix) |
svg |
55 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.797e+00 | 0.0010 | 228.0 | 28.79% | 10921.0 | 23.18% | motif file (matrix) |
svg |
56 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -8.773e+00 | 0.0010 | 38.0 | 4.80% | 1182.9 | 2.51% | motif file (matrix) |
svg |
57 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.207e+00 | 0.0017 | 41.0 | 5.18% | 1349.2 | 2.86% | motif file (matrix) |
svg |
58 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -7.809e+00 | 0.0025 | 5.0 | 0.63% | 36.2 | 0.08% | motif file (matrix) |
svg |
59 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -7.662e+00 | 0.0029 | 42.0 | 5.30% | 1432.1 | 3.04% | motif file (matrix) |
svg |
60 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -7.268e+00 | 0.0042 | 122.0 | 15.40% | 5450.9 | 11.57% | motif file (matrix) |
svg |
61 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-3 | -7.258e+00 | 0.0042 | 13.0 | 1.64% | 265.7 | 0.56% | motif file (matrix) |
svg |
62 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.058e+00 | 0.0051 | 21.0 | 2.65% | 569.2 | 1.21% | motif file (matrix) |
svg |
63 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.543e+00 | 0.0083 | 34.0 | 4.29% | 1153.9 | 2.45% | motif file (matrix) |
svg |
64 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -6.465e+00 | 0.0089 | 57.0 | 7.20% | 2242.0 | 4.76% | motif file (matrix) |
svg |
65 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -6.318e+00 | 0.0101 | 48.0 | 6.06% | 1822.5 | 3.87% | motif file (matrix) |
svg |
66 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.239e+00 | 0.0108 | 8.0 | 1.01% | 131.7 | 0.28% | motif file (matrix) |
svg |
67 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -6.203e+00 | 0.0110 | 6.0 | 0.76% | 76.1 | 0.16% | motif file (matrix) |
svg |
68 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.126e+00 | 0.0117 | 208.0 | 26.26% | 10332.8 | 21.93% | motif file (matrix) |
svg |
69 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.991e+00 | 0.0132 | 20.0 | 2.53% | 581.6 | 1.23% | motif file (matrix) |
svg |
70 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -5.815e+00 | 0.0155 | 35.0 | 4.42% | 1254.6 | 2.66% | motif file (matrix) |
svg |
71 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.682e+00 | 0.0175 | 9.0 | 1.14% | 176.2 | 0.37% | motif file (matrix) |
svg |
72 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.605e+00 | 0.0186 | 44.0 | 5.56% | 1698.1 | 3.60% | motif file (matrix) |
svg |
73 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.420e+00 | 0.0221 | 70.0 | 8.84% | 3014.4 | 6.40% | motif file (matrix) |
svg |
74 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.276e+00 | 0.0251 | 37.0 | 4.67% | 1395.0 | 2.96% | motif file (matrix) |
svg |
75 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.275e+00 | 0.0251 | 15.0 | 1.89% | 413.5 | 0.88% | motif file (matrix) |
svg |
76 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.153e+00 | 0.0277 | 101.0 | 12.75% | 4674.8 | 9.92% | motif file (matrix) |
svg |
77 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-2 | -4.971e+00 | 0.0328 | 10.0 | 1.26% | 233.0 | 0.49% | motif file (matrix) |
svg |
78 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.905e+00 | 0.0346 | 7.0 | 0.88% | 131.6 | 0.28% | motif file (matrix) |
svg |
79 |
| ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.796e+00 | 0.0381 | 2.0 | 0.25% | 8.2 | 0.02% | motif file (matrix) |
svg |
80 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -4.736e+00 | 0.0399 | 13.0 | 1.64% | 358.2 | 0.76% | motif file (matrix) |
svg |
81 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -4.700e+00 | 0.0409 | 52.0 | 6.57% | 2192.2 | 4.65% | motif file (matrix) |
svg |
82 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.636e+00 | 0.0430 | 23.0 | 2.90% | 795.8 | 1.69% | motif file (matrix) |
svg |
83 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-2 | -4.624e+00 | 0.0431 | 106.0 | 13.38% | 5036.4 | 10.69% | motif file (matrix) |
svg |