Information for 6-CCCTCTCTHACTAGGA (Motif 7)

G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
Reverse Opposite:
C A G T A G T C G T A C A C G T C G T A C T A G A C G T C A G T C T G A C A T G C T G A C T A G C G T A C T A G C A T G C A T G
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.698
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 25.5bp
Average Position of motif in Background45.6 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCCTCTCTHACTAGGA
-----GTTAACTAGN-
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTCTCTHACTAGGA---
--GANGTTAACTAGTTTNN
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A A C G T A C G T A C G T
A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCTCTCTHACTAGGA
-TCTTTANTAATANN-
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA
------GTAATTAG--
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA
------TTAATTAG--
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA
---TCTAAAAATAGA-
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

GSX1/MA0892.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA
-----CCTAATTAAA-
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T

NOTO/MA0710.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA
-----GCTAATTAGC-
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T

VSX2/MA0726.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA
------CTAATTAG--
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T A C G T

PH0160.1_Shox2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCCTCTCTHACTAGGA---
--CGCGTTAATTAATTGTG
 G A T C G A T C A G T C C G A T A G T C A G C T G A T C G A C T G C T A C G T A G A T C A C G T C G T A C A T G A C T G G C T A A C G T A C G T A C G T
A C G T A C G T T A G C C A T G G T A C T A C G A G C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A C A G T A G C T T C A G C A G T A T C G