Information for 4-CCCAAKGTGCACAGAG (Motif 4)

G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G
Reverse Opposite:
G T A C A C G T A G T C C G A T T A C G A C G T C T A G G A T C C G T A A G T C G T C A A C G T A C G T A C T G C A T G A C T G
p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.701
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.0 +/- 27.0bp
Average Position of motif in Background36.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG
-CAAAAGTAAACAAAG
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG--
-TACATGTGCACATAAAA
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG--
-CAGATGTGCACATACGT
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Foxk1/MA0852.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG--
-AAAATGTAAACAAACAG
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG--
-AAAATGTAAACAAACAG
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCAAKGTGCACAGAG
TGCCAAAATAAACANN-
 A C G T G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCAAKGTGCACAGAG
TACCCACAATGCATTG--
 A C G T A C G T G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:CCCAAKGTGCACAGAG
----------ACAAAG
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG--
-AAAAAGTAAACAAAGAC
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCAAKGTGCACAGAG----
----AAACAGACAAAGGAAT
 G T A C G A T C T A G C C G T A G T C A A C G T C T A G G A C T C T A G A G T C C G T A A G T C C G T A T C A G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T