Information for 7-GGTTGAACAA (Motif 33)

A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-9.785e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.7 +/- 30.7bp
Average Position of motif in Background58.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGTTGAACAA-
-GTTGCGCAAT
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGTTGAACAA-------
-AATGAACAATGGAATT
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GGTTGAACAA-
-----AACAAT
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGTTGAACAA-
--GTAAACAAT
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGAACAA------
NNNNNGAACAATTGANN
 A C G T A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGTTGAACAA-------
TAGTGAACAATAGATTT
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGTTGAACAA----
----GAACAATGGN
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGTTGAACAA--
-ATTGCACAATA
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTTGAACAA------
TCACGGAACAATAGGTG
 A C G T A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTTGAACAA------
TTTAGAACAATAAAAT
 A C T G A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T