Information for 16-CMAGCATACTRCA (Motif 31)

A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.130e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 30.4bp
Average Position of motif in Background46.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CMAGCATACTRCA-
WYATGCATWATGCAT
 A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CMAGCATACTRCA
-ATGCATAATTCA
 A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CMAGCATACTRCA-
TCATGAATWATTCAT
 A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CMAGCATACTRCA-----
-AATCGCACTGCATTCCG
 A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CMAGCATACTRCA
CAAGCTT------
 A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------CMAGCATACTRCA-----
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CMAGCATACTRCA--
CGAAGCACACAAAATA
 A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CMAGCATACTRCA
TACCCGCATN-----
 A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CMAGCATACTRCA
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CMAGCATACTRCA
ATTTCCCAGVAKSCY---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T A G A G T C G T C A A C G T T C G A A G T C A C G T C T A G A G T C C G T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T