Information for 13-CASGATCCTGACMTTR (Motif 24)

A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A
Reverse Opposite:
A G C T G T C A C G T A A C G T A T C G C A G T G A T C G C T A A C T G T A C G T G C A A C G T A T G C A T C G G A C T A T C G
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.616
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif184.6
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets45.0 +/- 23.0bp
Average Position of motif in Background49.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CASGATCCTGACMTTR-
-------NTGACCTTGA
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR-
-------ATGACCTTGA
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR
------BNTGDCCTTG
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR
-------GTGACCTT-
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR----
---NNNNATGACCTTGANTN
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR--
--------TGACCTTGAT
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR
--------TGACCTYA
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR--
--------TGACCTTGAV
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CASGATCCTGACMTTR-
-------CTGACCTTTG
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CASGATCCTGACMTTR
-------TTGACAG--
 A T G C C G T A T A G C T A C G C G T A A C G T A T G C T G A C C A G T C T A G G C T A A T G C G T C A G C A T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T