Information for 3-SYTRTGTTCT (Motif 21)

A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T
Reverse Opposite:
T C G A C T A G C G T A C G T A A T G C C G T A A G C T C G T A T C A G A T G C
p-value:1e-7
log p-value:-1.666e+01
Information Content per bp:1.671
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif646.1
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets46.7 +/- 26.1bp
Average Position of motif in Background48.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:SYTRTGTTCT---
---CTGTTCCTGG
 A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-SYTRTGTTCT------
NNCTTTGTTTTGNTNNN
 A C G T A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--SYTRTGTTCT--
NNGTANTGTTTTNC
 A C G T A C G T A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:SYTRTGTTCT-------
CTAAGGTTCTAGATCAC
 A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----SYTRTGTTCT---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:SYTRTGTTCT-------
--AGNGTTCTAATGANN
 A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----SYTRTGTTCT---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-SYTRTGTTCT----
NCNTTTGTTATTTNN
 A C G T A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:SYTRTGTTCT-
---GTGACCTT
 A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---SYTRTGTTCT--
AACCCTTTGATCTTT
 A C G T A C G T A C G T A T C G A G T C G C A T T C G A A C G T T A C G G C A T C G A T G A T C A G C T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T