Information for 10-GGACTCTTTATTG (Motif 20)

C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G
Reverse Opposite:
T G A C G T C A C G T A C A G T C G T A C G T A C G T A C T A G C G T A C T A G C G A T G T A C G T A C
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.473
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 28.0bp
Average Position of motif in Background59.0 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GGACTCTTTATTG-
----TTTTTATTGG
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGACTCTTTATTG
-GAATGTTTGTTT
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGACTCTTTATTG-
----NTTTTATTGG
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGACTCTTTATTG
-TATTGTTTATT-
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G
A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGACTCTTTATTG-
----TTTTTATTGC
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGACTCTTTATTG-
----NTTTTATTGG
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGACTCTTTATTG----
-NNAATTTTATTGGNTN
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GGACTCTTTATTG-
-----TTTTATTGC
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGACTCTTTATTG
----TGTTTATTT
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G
A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGACTCTTTATTG--
----NTTTTATTACN
 C A T G C A T G G C T A G A T C G C A T G A T C G C A T G C A T G C A T G T C A G C A T C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C