Information for 8-KGGWARTWAATGA (Motif 16)

A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T C G A T G T C A A G C T A C G T C G T A A G T C A G T C G T A C
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.2 +/- 24.0bp
Average Position of motif in Background47.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:KGGWARTWAATGA----
-AGTTATTAATGAGGTC
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:KGGWARTWAATGA-----
--NNAATTAATGACCNNN
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0120.1_Nkx6-3/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:KGGWARTWAATGA-----
-GAAAATTAATTACTTTG
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:KGGWARTWAATGA----
-AGTAATTAATTACTTC
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:KGGWARTWAATGA-----
-GAAAATTAATTACTTCG
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0038.1_Hlx/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:KGGWARTWAATGA---
-TGTAATTAATTATGG
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--KGGWARTWAATGA-
ACCGGCAATTAATAAA
 A C G T A C G T A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:KGGWARTWAATGA----
-TTTAATTAATTAATTC
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:KGGWARTWAATGA-----
-GATAATTAATTAGTTTG
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0142.1_Pou1f1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:KGGWARTWAATGA----
GATTAATTAATTAAGTC
 A C T G A C T G C T A G C G A T C G T A C T G A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C