Information for 4-ARGATTMARGAYA (Motif 12)

C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A G T C A G T C A C G T A C T G C G T A C G T A A C G T A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.4 +/- 27.4bp
Average Position of motif in Background68.2 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ARGATTMARGAYA--
-ACATTCATGACACG
 C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ARGATTMARGAYA
NGGATTAA-----
 C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ARGATTMARGAYA
VRGGATTARN----
 A C G T C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ARGATTMARGAYA
RGGATTAR-----
 C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ARGATTMARGAYA
GGGATTAA-----
 C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ARGATTMARGAYA
TTAGAGGGATTAACAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ARGATTMARGAYA
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ARGATTMARGAYA
CGGATTAN-----
 C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ARGATTMARGAYA
GGGATTANN----
 C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ARGATTMARGAYA
TGAACCGGATTAATGAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G C G T A A C G T A C G T G T A C C G T A C T A G C T A G C G T A G A T C C G T A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T