Information for 4-CCCTGGGGCA (Motif 5)

A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
Reverse Opposite:
A G C T A C T G T G A C A G T C G A T C A T G C C T G A C T A G C T A G T A C G
p-value:1e-25
log p-value:-5.983e+01
Information Content per bp:1.690
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif16.60%
Number of Background Sequences with motif2618.8
Percentage of Background Sequences with motif5.61%
Average Position of motif in Targets54.6 +/- 25.3bp
Average Position of motif in Background49.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B/MA0811.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGGGCA
TGCCCCAGGGCA
 A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGGCA
TGCCCTNGGGCA
 A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCA--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCA
ATGCCCTGAGGC-
 A C G T A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGCA-
NTGCCCTAGGGCAA
 A C G T A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGGGCA
TGCCCCCGGGCA
 A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCA--
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGGGCA
NGCCTGAGGCN
 A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGGCA
TCCCCTGGGGAC
 A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGCA
WTGSCCTSAGGS-
 A C G T A C G T A C G T A T G C A G T C A G T C G A C T A T C G C T A G C T A G A C T G G T A C T C G A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T