Information for 25-CCTGGCCGCCCTCCGG (Motif 40)

A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
Reverse Opposite:
A T G C T A G C A C T G A T C G C G T A C T A G T C A G A C T G A G T C C A T G A T C G T A G C T A G C T C G A A C T G C T A G
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.647
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif135.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets55.9 +/- 27.2bp
Average Position of motif in Background50.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGCCGCCCTCCGG
GYCTGGYYTNTGTCA--
 A C G T A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGCCGCCCTCCGG
TGCCTGCGYCMCCTT---
 A C G T A C G T A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTGGCCGCCCTCCGG
---GGCCACRCCCMK-
 A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTGGCCGCCCTCCGG
-CTGGCAGNCTGCCA-
 A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGCCGCCCTCCGG
NNNGGGGCGCCCCCNN-
 A C G T A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTGGCCGCCCTCCGG
CTTGGCANNNTGCCAA
 A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCTGGCCGCCCTCCGG
---GGCCCCGCCCCC-
 A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCTGGCCGCCCTCCGG
TGTTKCCTAGCAACM------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTGGCCGCCCTCCGG
GCCCCGCCCCCTCCC--
 A C G T A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCTGGCCGCCCTCCGG
----YCCGCCCACGCN
 A G T C G T A C A G C T A T C G A C T G A T G C G A T C C T A G T A G C A G T C A G T C G A C T A T G C G T A C A T C G T A C G
A C G T A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A