Information for 15-AGCGGGTCAAVCT (Motif 28)

C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G C G A T A C G T A C T G G T C A A G T C A T G C G T A C T A C G A G T C A C G T
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.819
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 20.3bp
Average Position of motif in Background83.3 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGTCAAVCT
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCGGGTCAAVCT
---AGGTCA----
 C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGTCAAVCT-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCGGGTCAAVCT-----
--GGGGTCAAAGTCCAAT
 C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCGGGTCAAVCT
-AGRGGTCA----
 C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGTCAAVCT
NTNTGGGGGGTCNNNA-
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGCGGGTCAAVCT-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGTCAAVCT-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGTCAAVCT
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGCGGGTCAAVCT-
-------CAAGCTT
 C G T A A C T G A T G C A C T G T A C G A C T G C A G T T A G C G T C A C G T A T A G C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T