Information for 13-KTRCAAAAKTGMA (Motif 20)

A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A
Reverse Opposite:
A C G T A C T G A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C T G A G T C C G T A G T C A
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:KTRCAAAAKTGMA---
-GAAAAAATTGCAAGG
 A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---KTRCAAAAKTGMA
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KTRCAAAAKTGMA
ATTGCACAATA---
 A C G T A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KTRCAAAAKTGMA---
--ACGAAAGCGAAAGT
 A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:KTRCAAAAKTGMA---
----GAAAGTGAAAGT
 A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KTRCAAAAKTGMA----
-GGCAAAAGTCCAATAA
 A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-KTRCAAAAKTGMA
VTTRCATAAY----
 A C G T A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KTRCAAAAKTGMA
TTGCAACATN---
 A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-KTRCAAAAKTGMA
ATTGCATAA-----
 A C G T A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:KTRCAAAAKTGMA---
----GAAACTGAAACT
 A C G T A C G T C T A G A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C T G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T