Information for 10-AAAGTCAGGGAGA (Motif 12)

C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
Reverse Opposite:
A G C T A G T C C G A T A T G C A G T C G T A C A C G T A C T G C T G A A G T C A C G T A C G T A C G T
p-value:1e-12
log p-value:-2.790e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 33.7bp
Average Position of motif in Background53.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGTCAGGGAGA
AAAAGTCAA-----
 A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGTCAGGGAGA--
NAGGTCACNNTGACC
 C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAGTCAGGGAGA
CAAGGHCANV----
 A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTCAGGGAGA
TCAAGGTCAN-----
 A C G T A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAGTCAGGGAGA----
CAGGTCACCGTGACCTT
 C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAGTCAGGGAGA
BTCAAGGTCA------
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAGTCAGGGAGA
CAAAGGTCAG-----
 A C G T A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAGTCAGGGAGA
TCAAGGTCAT-----
 A C G T A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGTCAGGGAGA
ANGNAAAGGTCA------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AAAGTCAGGGAGA
AAGTTCAAGGTCAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G G A C T A G T C C G T A A C T G C T A G A T C G C G T A C T A G C T G A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T