Information for 9-WAATMASATTATAAWW (Motif 11)

C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
Reverse Opposite:
C G A T G C A T G A C T G A C T G C T A C G A T C T G A C G T A A C G T T A C G C G A T C A G T G T C A C G A T C A G T G C A T
p-value:1e-12
log p-value:-2.902e+01
Information Content per bp:1.580
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif506.6
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets48.9 +/- 21.8bp
Average Position of motif in Background50.9 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:WAATMASATTATAAWW---
---TAAGATTATAATACGG
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WAATMASATTATAAWW
YTAATYNRATTA-----
 A C G T C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-WAATMASATTATAAWW
NTAATBNAATTA-----
 A C G T C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:WAATMASATTATAAWW---
---NANTATTATAATTNNN
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WAATMASATTATAAWW
TAATTAAATTA-----
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WAATMASATTATAAWW
GTAATCDGATTA-----
 A C G T C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WAATMASATTATAAWW
TAATTAAATTA-----
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:WAATMASATTATAAWW---
---TTTAATTATAATTAAG
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PROP1/MA0715.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WAATMASATTATAAWW
TAATTAAATTA-----
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WAATMASATTATAAWW---
---NNTAATTATAATTNNN
 C G T A G T C A G C T A C A G T G T C A C G T A A T G C G T C A G C A T G A C T C G T A C G A T C T G A C T G A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C