p-value: | 1e-14 |
log p-value: | -3.281e+01 |
Information Content per bp: | 1.670 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 2.02% |
Number of Background Sequences with motif | 48.4 |
Percentage of Background Sequences with motif | 0.10% |
Average Position of motif in Targets | 57.0 +/- 15.4bp |
Average Position of motif in Background | 53.7 +/- 28.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0166.1_Sox12_2/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTCAMCMAGACAGAGG--- ---AAACAGACAAAGGAAT |
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Sox3/MA0514.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GTCAMCMAGACAGAGG ------AAAACAAAGG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTCAMCMAGACAGAGG -----CCAGACAG--- |
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PB0121.1_Foxj3_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTCAMCMAGACAGAGG- AACACCAAAACAAAGGA |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GTCAMCMAGACAGAGG NNTNGNNGTAACCAAGNNNNAGN |
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ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCAMCMAGACAGAGG NAGGTCACNNTGACC---- |
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Sox2/MA0143.3/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GTCAMCMAGACAGAGG --------AACAAAGG |
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ESR2/MA0258.2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCAMCMAGACAGAGG AGGTCACCCTGACCT--- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTCAMCMAGACAGAGG- CAAATCCAGACATCACA |
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TFAP2B(var.2)/MA0812.1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GTCAMCMAGACAGAGG-- -------AGCCTCAGGCA |
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