Information for 6-AATCTGACAT (Motif 6)

T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
Reverse Opposite:
G C T A C A G T A T C G A C G T T G A C C T G A T A C G T G C A C G A T A G C T
p-value:1e-18
log p-value:-4.325e+01
Information Content per bp:1.662
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif10.65%
Number of Background Sequences with motif1531.0
Percentage of Background Sequences with motif3.28%
Average Position of motif in Targets43.1 +/- 27.7bp
Average Position of motif in Background49.6 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AATCTGACAT
-ARNTGACA-
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AATCTGACAT
---TTGACAG
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AATCTGACAT
GGTCTGGCAT
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AATCTGACAT-
---YTGWCADY
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T A C G T
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATCTGACAT
GWAAYHTGABMC
 A C G T A C G T T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AATCTGACAT-
-VGCTGWCAVB
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATCTGACAT
CCAACTGCCA-
 A C G T T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AATCTGACAT
----TGACGT
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATCTGACAT----
----TGACCTTGAT
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATCTGACAT--
----TGACCTYA
 T C G A G C T A A C G T A T G C G A C T A C T G T G C A T A G C G T C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A