Information for 25-GCTGTYATTCATCTTA (Motif 33)

A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
Reverse Opposite:
A C G T C G T A C T G A C T A G C G T A C G A T C T A G C G T A G T C A C G A T T C A G C G T A G T A C C G T A A C T G G T A C
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.732
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.1 +/- 30.0bp
Average Position of motif in Background38.2 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCTGTYATTCATCTTA
GSCTGTCACTCA-----
 A C G T A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTGTYATTCATCTTA
NCTGTCAATCAN----
 A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTYATTCATCTTA
NNNCAGCTGTCAATATN----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTGTYATTCATCTTA
SCTGTCAVTCAV----
 A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGTYATTCATCTTA
GCTGTCAA--------
 A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCTGTYATTCATCTTA
----TGAGTCATTTC-
 A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTYATTCATCTTA
AAGACGCTGTAAAGCGA----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTYATTCATCTTA
AAGACGCTGTAAAGCGA----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTYATTCATCTTA
AAGCACCTGTCAATAT-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTGTYATTCATCTTA
--TGTGACTCATT---
 A C T G A G T C A C G T C A T G A C G T A G T C C G T A A C G T G C A T G A T C C G T A C G A T A G T C A G C T G A C T T C G A
A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T A C G T