Information for 22-TGGCTCTCTGATGGTG (Motif 28)

C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
Reverse Opposite:
T A G C G C T A G T A C T G A C C G T A C A G T T A G C C T G A A C T G C T G A C T A G C T G A A C T G A T G C A G T C C G T A
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.680
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif49.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.9 +/- 29.8bp
Average Position of motif in Background47.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTCTGATGGTG
CTGTCTGTCACCT----
 A C G T C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGCTCTCTGATGGTG
-NGCTN----------
 C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGCTCTCTGATGGTG
TGTCTGDCACCT----
 C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGCTCTCTGATGGTG
-GGCGCGCT-------
 C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTCTCTGATGGTG
NTTGGCANN---------
 A C G T A C G T C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TGGCTCTCTGATGGTG
NVCAKCTGGNNNCCAGMTGB--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGGCTCTCTGATGGTG
--ACTTCCTGNT----
 C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGCTCTCTGATGGTG
-GGCCYCCTGCTGDGH
 C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGCTCTCTGATGGTG
--GCTCCG--------
 C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-9
Orientation:forward strand
Alignment:---------TGGCTCTCTGATGGTG
MACCTTCYATGGCTCCCTAKTGCCY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A T C G A G T C A G C T G A T C A G C T A G T C G A C T A C T G G T C A C G A T A C T G A C T G C G A T A T C G
T G C A T G C A A G T C A G T C G A C T C A G T A T G C G A T C C T G A A C G T C T A G C T A G A G T C A C G T A G T C A G T C A G T C G A C T C G T A A C G T A G C T C T A G G A T C G A T C G A T C