Information for 9-GGGTTTTGTTCAG (Motif 7)

A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G
Reverse Opposite:
A G T C C A G T T A C G T G C A G T C A G T A C G C T A G T C A C G T A C T G A A G T C G T A C A G T C
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.692
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 29.0bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTTTGTTCAG-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTTTGTTCAG--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGTTTTGTTCAG--
-TTTTTTTTCNNGTN
 A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTTTGTTCAG--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGGTTTTGTTCAG
--CCTTTGTTTT-
 A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGTTTTGTTCAG----
-NNTTTTGTTTTGATNT
 A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T A C G T A C G T A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTTTGTTCAG-
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGGTTTTGTTCAG
--YCTTTGTTCC-
 A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGGTTTTGTTCAG
--CCWTTGTY---
 A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTTTGTTCAG--
NNANTTTTATTGGNNN
 A C G T A C T G A C T G T A C G A G C T C G A T C A G T C G A T C A T G C A G T A C G T A T G C G T C A C T A G A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G