Information for 8-CACATWTGTGGAA (Motif 6)

A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T G T A C A G T C C G T A G T A C C T G A C G A T G T C A G A C T C T A G A C G T A C T G
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 23.2bp
Average Position of motif in Background63.8 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T/MA0009.2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CACATWTGTGGAA
TCACACCTAGGTGTGA
 A C G T A C G T A C G T A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

TBX19/MA0804.1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACATWTGTGGAA--
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A A C G T A C G T
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACATWTGTGGAA
NACATATGGN---
 A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CACATWTGTGGAA
-CCATATGT----
 A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CACATWTGTGGAA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

Atoh1/MA0461.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACATWTGTGGAA
ANCATATGTT---
 A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACATWTGTGGAA
GACATATGTT---
 A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACATWTGTGGAA
GCACGTAY------
 A C G T A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACATWTGTGGAA
GCACGTACCC----
 A C G T A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACATWTGTGGAA-
NNNCCATTGTGTNAN
 A C G T A G T C C G T A A G T C C T G A C A G T C G T A A G C T A C T G A C G T C T A G A C T G C T G A C G T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G