Information for 6-AGYGCCCTCTATG (Motif 4)

C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
Reverse Opposite:
G T A C C T G A A C G T C G T A A C T G C G T A A C T G A C T G A C T G A G T C C T A G G T A C A C G T
p-value:1e-12
log p-value:-2.965e+01
Information Content per bp:1.856
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.2 +/- 19.8bp
Average Position of motif in Background47.7 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGYGCCCTCTATG----
NTCNTCCCCTATNNGNN
 C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGYGCCCTCTATG-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGYGCCCTCTATG---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGYGCCCTCTATG-----
TAGCGCCCCCTGGTGGCCA
 A C G T C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGYGCCCTCTATG
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGYGCCCTCTATG
--NSCACTYVAV-
 C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGYGCCCTCTATG
-AASCACTCAA--
 C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGYGCCCTCTATG
-ATGCCCACC---
 C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGYGCCCTCTATG
RGTTAGTGCCCY-----
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGYGCCCTCTATG
--TGACCYCT---
 C G T A A C T G A G C T A C T G A G T C G T A C A G T C A C G T A G T C A C G T G T C A A G C T A C T G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T