Information for 6-TCTCTCTCTCTCYCTC (Motif 28)

A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
Reverse Opposite:
C T A G C T G A C T A G C T G A A C T G C T G A C T A G C G T A A C T G C G T A C T A G C G T A A T C G C G T A A T C G C G T A
p-value:1e-2
log p-value:-6.501e+00
Information Content per bp:1.813
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.9 +/- 28.9bp
Average Position of motif in Background49.2 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTCTCTCTCTCYCTC
-CTGTCTGTCACCT--
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTCTCTCTCTCYCTC
ACTTTCACTTTC----
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTCTCTCYCTC
TCACTTTCACTTTCN---
 A C G T A C G T A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCYCTC
ACTTTCACTTTC----
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCYCTC
ASTTTCASTTYC----
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCTCTCTCTCTCYCTC-
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCTCTCTCTCTCYCTC
--TGTCTGDCACCT--
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTCTCTCTCTCYCTC
AGTTTCAGTTTC----
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCTCTCTCYCTC
GTTTTGCTTTCACTTTCC---
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCYCTC
CTTATCTCHMCATCT-
 A C G T T A G C A C G T T A G C A C G T A G T C A C G T G T A C A C G T A G T C A G C T A G T C A G C T A G T C G A C T A G T C
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T