Information for 19-GGAGCTGGAATCA (Motif 20)

A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G C G T A A G C T A C G T A T G C A G T C C G T A A C T G A G T C A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 24.9bp
Average Position of motif in Background55.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGGAATCA
CGGAGC--------
 A C G T A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAGCTGGAATCA
-GGTCTGGCAT--
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAGCTGGAATCA-----
-AAGGCGAAATCATCGCA
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGGAATCA
GGGAATTGTAGT--
 A C G T A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGAGCTGGAATCA
---NCTGGAATGC
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGAGCTGGAATCA
---CCWGGAATGY
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGAGCTGGAATCA
---CCWGGAATGY
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
A C G T A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGAGCTGGAATCA
GGAAGTGAAAST-
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:9
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGCTGGAATCA
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GGAGCTGGAATCA-
------CCAATCAA
 A C T G A C T G C G T A C T A G A G T C A C G T A C T G A T C G C G T A C T G A A C G T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A