Information for 6-GTTGAACATA (Motif 10)

A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A
Reverse Opposite:
A G C T C G T A A C G T A T C G A C G T A C G T A T G C G T C A C G T A T A G C
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.858
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets53.8 +/- 28.2bp
Average Position of motif in Background43.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTGAACATA------
AGAAGAACAAAGGACTA
 A C G T A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTTGAACATA----
----AACATATGTT
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTTGAACATA-----
---AAACATATGTTT
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTGAACATA------
ATAAGAACAAAGGACTA
 A C G T A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTTGAACATA----
AAAGTAAACAAAAATT
 A C G T A C G T A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXD1/MA0031.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTGAACATA
-GTAAACAT-
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A
A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTGAACATA
-GTAAACAA-
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A
A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTTGAACATA----
----ACCATATGGT
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTTGAACATA----
----ACCATATGTT
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTGAACATA--
--GGAACAAAGR
 A T C G A C G T A C G T T A C G C G T A C G T A A T G C C G T A C G A T C T G A A C G T A C G T
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G