Information for 7-GGTAACTGSWGGC (Motif 6)

A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
Reverse Opposite:
C T A G A T G C A G T C C G A T A T C G A G T C C G T A A C T G C G A T A C G T C G T A A G T C A G T C
p-value:1e-10
log p-value:-2.463e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.1 +/- 14.4bp
Average Position of motif in Background52.5 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTAACTGSWGGC
-NHAACBGYYV--
 A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTAACTGSWGGC--
GGGTTACTANAGGTCA
 A C G T A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGTAACTGSWGGC--
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTAACTGSWGGC
GGGAATTGTAGT-
 A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTAACTGSWGGC
AGGGTAACAGC----
 A C G T A C G T A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTAACTGSWGGC
AGGAAACAGCTG--
 A C G T A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGTAACTGSWGGC
--NAACAGCTGG-
 A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTAACTGSWGGC
NGNGACAGCTGCN
 A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGTAACTGSWGGC
--YAACBGCC---
 A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C
A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTAACTGSWGGC--
GAAGAACAGGTGTCCG
 A C G T A C T G A C T G C G A T C G T A C G T A A G T C A C G T A C T G A T G C C G T A A C T G T A C G A G T C A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G