Information for 23-ACCAAGAGGCAGA (Motif 32)

G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C T G A G T C A G T C A C G T G A T C A C G T A G C T A C T G A T C G C G A T
p-value:1e-8
log p-value:-2.048e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 24.3bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCAAGAGGCAGA
TCACCTCTGGGCAG-
 A C G T A C G T G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACCAAGAGGCAGA
TGCCCCAGGGCA--
 A C G T G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACCAAGAGGCAGA--
-----ATGCCAGACN
 G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACCAAGAGGCAGA
TGCCCCAGGGCA--
 A C G T G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACCAAGAGGCAGA
TGCCCCCGGGCA--
 A C G T G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACCAAGAGGCAGA
CCGCCCAAGGGCAG-
 A C G T A C G T G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACCAAGAGGCAGA--
---AGGTGHCAGACA
 G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:ACCAAGAGGCAGA-----
--------CCAGACRSVB
 G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ACCAAGAGGCAGA--
-----GAGSCCGAGC
 G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACCAAGAGGCAGA
--CAAAGGTCAG-
 G C T A A T G C A G T C T C G A G T C A C A T G C G T A A C T G C T A G A G T C C G T A A C T G C G T A
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T