Information for 7-CAGCTGCAGCCVCCTG (Motif 6)

A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T A G A C T G C T A G A C T G A G T C G A C T A C T G A G T C C G T A A C T G A G T C C G A T C T A G
p-value:1e-12
log p-value:-2.850e+01
Information Content per bp:1.793
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 25.0bp
Average Position of motif in Background44.6 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGCCVCCTG
AGCAGCTGCTNN------
 A C G T A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGCTGCAGCCVCCTG
-AGATGCTRCTRCCHT
 A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGCCVCCTG
CTCAGCAGCTGCTACTG-
 A C G T A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCAGCCVCCTG
NCAGCTGCTG-------
 A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGCTGCAGCCVCCTG
-AGCAGCTGCT-----
 A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGCCVCCTG
GACAGCTGCAG-------
 A C G T A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGCCVCCTG
AACAGCTGCAG-------
 A C G T A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGCAGCCVCCTG
CGCAGCTGCG--------
 A C G T A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCAGCCVCCTG
NNACAGCTGC---------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CAGCTGCAGCCVCCTG--
--------GCCATCTGTT
 A G T C C G T A A C T G A G T C G C A T C T A G A G T C C T G A A C T G A G T C A G T C T A G C A G T C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T