Information for 5-AGTGCWGCMCCWWGAG (Motif 3)

C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G
Reverse Opposite:
A T G C G C A T A G T C C G T A C G A T A C T G A C T G C A T G A C T G A T G C C G T A A C T G G A T C G T C A G T A C A C G T
p-value:1e-14
log p-value:-3.400e+01
Information Content per bp:1.756
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 25.4bp
Average Position of motif in Background52.0 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGTGCWGCMCCWWGAG--
-----TGCCCTNAGGGCA
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG--
-----TGCCCTGAGGGCA
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG--
-----TGCCCTGAGGGCA
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGTGCWGCMCCWWGAG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG-
-----NGTCCCNNGGGA
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG---
---------CCATGTGCTT
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------AGTGCWGCMCCWWGAG-
CACAAGGGARWARGRCACCATGAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG-
AGGAGACCCCCAATTTG
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG-
-----GTCCCCAGGGGA
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGTGCWGCMCCWWGAG-
----ATGCAACAGGTGG
 C G T A C A T G A C G T C T A G G T A C C G A T A T C G A G T C G T A C G T A C A G T C C G T A C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G