Information for 12-CATTGGCCCGGGG (Motif 18)

A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
Reverse Opposite:
G A T C A G T C A G T C G T A C A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C T G
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.8 +/- 15.8bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGCCCGGGG
CCGATTGGCT-----
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATTGGCCCGGGG
TGATTGGCTANN--
 A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGCCCGGGG
CTGATTGGTCNATTT
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CATTGGCCCGGGG
--TTGGCA-----
 A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATTGGCCCGGGG
-NTTGGCANN---
 A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATTGGCCCGGGG--
NNNNTGACCCGGCGCG
 A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTGGCCCGGGG
CTCATTGTC------
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CATTGGCCCGGGG
AGGTCANTGACCTN---
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATTGGCCCGGGG--
NNCNTGACCCCGCTCT
 A C G T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTGGCCCGGGG
NNTTGGCANN---
 A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C T G C A T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T