Information for 9-CCCGGCGCCACCA (Motif 12)

A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 16.0bp
Average Position of motif in Background68.8 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCGGCGCCACCA--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGCGCCACCA-
TGCCTGCGYCMCCTT
 A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCGGCGCCACCA--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCGGCGCCACCA
-AGCGCGCC----
 A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCGGCGCCACCA
--CGGAGC-----
 A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCGGCGCCACCA-
NNNGGGGCGCCCCCNN
 A C G T A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGGCGCCACCA
TGCCCCCGGGCA---
 A C G T A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGGCGCCACCA
CCCCCGCCCCCGCC-
 A C G T A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCCGGCGCCACCA------
CNNBRGCGCCCCCTGSTGGC
 A C G T A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCCGGCGCCACCA
TTTGGCGCCAAA-
 A G T C G T A C A G T C A C T G A C T G T A G C A C T G A G T C A G T C G T C A A G T C A T G C C G T A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T