Information for 8-NCCTCCTGGCACTGKC (Motif 11)

A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
Reverse Opposite:
T C A G T G C A A G T C C G T A A C T G A C G T A C T G A T G C A G T C C G T A A C T G C T A G C G T A A C T G A T C G T A C G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.799
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.4 +/- 13.4bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-NCCTCCTGGCACTGKC
CGCCCCCTGACA-----
 A C G T A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:NCCTCCTGGCACTGKC
NNCACCTGNN------
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:NCCTCCTGGCACTGKC----
GCCTCCTCCMTCWGACTGKS
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:NCCTCCTGGCACTGKC
----CTTGGCAA----
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-NCCTCCTGGCACTGKC
SNGCACCTGCHS-----
 A C G T A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:NCCTCCTGGCACTGKC
CGCACCTGCT------
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:NCCTCCTGGCACTGKC
TACACCTGTC------
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:NCCTCCTGGCACTGKC
NVCAGCTGBBNN----
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:NCCTCCTGGCACTGKC
AACACCTGCT------
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:NCCTCCTGGCACTGKC
----NTTGGCANN---
 A G T C A T G C A G T C G C A T A G T C G T A C A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T