Information for 8-AGGACCATGGGAA (Motif 10)

C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A C T G A C G T A G T C G T A C A G C T
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 21.2bp
Average Position of motif in Background38.2 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:AGGACCATGGGAA--
-----CSTGGGAAAD
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGACCATGGGAA--
RGSMTBCTGGGAAAT
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGACCATGGGAA--
NNTNNACAATGGGANNN
 A C G T A C G T C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGACCATGGGAA-
ATTCCCAAGGGAAT
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGACCATGGGAA
AAAACAATGG---
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGACCATGGGAA-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGACCATGGGAA-----
TCAGCACCATGGACAGCTCC
 A C G T A C G T C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGACCATGGGAA--
-TTGCCATGGCAACC
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T
A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGACCATGGGAA--
-TTGCCATGGCAACN
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A A C G T A C G T
A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGACCATGGGAA
-GAACAATGGN--
 C T G A A C T G A C T G G T C A A G T C A G T C C G T A A C G T A C T G C T A G A C T G C G T A C G T A
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T