Information for 8-GGGGCGCTGCCGG (Motif 5)

A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G
Reverse Opposite:
A T G C A T G C A T C G A C T G T A G C C G T A A C T G A T G C A C T G T A G C A T G C A G T C T A G C
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.764
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif55.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.7 +/- 30.7bp
Average Position of motif in Background50.7 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGGCGCTGCCGG
--NCCACTTCCGG
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G
A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGGCGCTGCCGG-----
---DCHCAGCAGGRGGCC
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ELK4/MA0076.2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGGGCGCTGCCGG-
---CCACTTCCGGC
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G A C G T
A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGCTGCCGG
GGGGGCGGGGCC--
 A C G T A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGCTGCCGG
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGCTGCCGG
AGGGGGCGGGGCTG-
 A C G T A C G T A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

ELK1/MA0028.2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGGGCGCTGCCGG-
----NACTTCCGGT
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGGCGCTGCCGG-----
---NCGCAGCGGGGGGTC
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGGCGCTGCCGG---
-GAGCACAGCAGGACA
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGGGCGCTGCCGG--
-----ACTTCCGGNT
 A C T G C T A G A T C G A T C G A G T C T A C G A G T C G A C T A C T G T A G C T A G C A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T