Information for 9-GAGCGCCCCCCGG (Motif 5)

A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G
Reverse Opposite:
A T G C A T G C C T A G A T C G A C T G T C A G A T C G A T C G G T A C A T C G A T G C A G C T T A G C
p-value:1e-13
log p-value:-3.011e+01
Information Content per bp:1.677
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif168.4
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets58.5 +/- 23.2bp
Average Position of motif in Background46.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGCGCCCCCCGG-
TTGGGGGCGCCCCTAG
 A C G T A C G T A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGCGCCCCCCGG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCGCCCCCCGG----
AAATTCCCCCCGGAAGT
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAGCGCCCCCCGG--
---CGCCCCCTGACA
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T A C G T
A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGCGCCCCCCGG
-AGCGCGCC----
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCGCCCCCCGG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGCGCCCCCCGG
--AAGACCCYYN-
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGCGCCCCCCGG-----
---NCCCCCCCGGGGGGN
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCGCCCCCCGG------
TAGCGCCCCCTGGTGGCCA
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCGCCCCCCGG
CAGCC--------
 A T C G C T G A T A C G T A G C C A T G T A G C A T G C A G T C A G T C T A G C G A T C T A C G T A C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T