Information for 8-AGACAGCCTC (Motif 13)

C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
Reverse Opposite:
A T C G C T G A C A T G T C A G A T G C C A G T A C T G A C G T A G T C G A C T
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.830
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif176.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets47.5 +/- 28.0bp
Average Position of motif in Background49.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCTC
CCAGACAG----
 A C G T A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCTC
CCAGACRSVB--
 A C G T A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGACAGCCTC---
AGCAACAGCCGCACC
 A C G T A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGACAGCCTC
-CACAGN---
 C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGACAGCCTC
TTGACAGC---
 A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AGACAGCCTC
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCTC
BCAGACWA----
 A C G T A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGACAGCCTC
TTGACAGG---
 A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGACAGCCTC--
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGACAGCCTC
TTGACAG----
 A C G T C T G A T C A G G T C A A G T C G T C A A T C G A G T C G T A C G A C T A T G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T