Information for 6-TRYCWCMCASTGGAGM (Motif 9)

A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C C G T A A T C G A C G T A C T G A C G T A C T G C G T A A C T G C T A G A G T C C G T A
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 17.0bp
Average Position of motif in Background55.8 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:TRYCWCMCASTGGAGM
---------GTGGAT-
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TRYCWCMCASTGGAGM
-CTCACACAATGGCGC
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TRYCWCMCASTGGAGM
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TRYCWCMCASTGGAGM---
---CAATCACTGGCAGAAT
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TRYCWCMCASTGGAGM
----TCCCNNGGGACN
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TRYCWCMCASTGGAGM
------CCACTTGAA-
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TRYCWCMCASTGGAGM---
--ATAACCACTTGAAAATT
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TRYCWCMCASTGGAGM
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TRYCWCMCASTGGAGM--
--TAAGCCACTTGAAATT
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A A C G T A C G T
A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TRYCWCMCASTGGAGM---
--AATCGCACTGCATTCCG
 A C G T C T A G A G T C A G T C C G A T A G T C G T C A A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G